I am able to get data into local mysql for cromwell. However, I can't quite figure out what the model is for data from the WDL jobs in cromwell to a sql database. Is there documentation of what gets stored when?
There's no user documentation of what Cromwell stores in a database (though you could probably find plenty of developer documentation in the source code). We expect our REST endpoints provide all the workflow data a user needs--is there something you can't access through an endpoint that you're hoping to find in the database?