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Localization via hard link has failed
i got a general problem with the localization of the workflow-files, cromwell allways copy the files instead of creating a hardlink, which consumes at least a lot of diskspace. During the workflow i got the following warn-message:
2013-10-27 19:32:14,238 WARN - Localization via hard link has failed: /data/cromwell_runs/2017/April/cromwell-executions/PairedEndSingleSampleWorkflow/d82e4595-d587-4e70-81e8-2d019685b179/call-BaseRecalibratorNormal/shard-212/inputs/data/cromwell_runs/2017/April/cromwell-executions/PairedEndSingleSampleWorkflow/d82e4595-d587-4e70-81e8-2d019685b179/call-SortAndFixTagsNormal/execution/SampleXYZ_S2.lane1.sorted.bai -> /data/cromwell_runs/2017/April/cromwell-executions/PairedEndSingleSampleWorkflow/d82e4595-d587-4e70-81e8-2d019685b179/call-SortAndFixTagsNormal/execution/SampleXYZ_S2.lane1.sorted.bai: Die Operation ist nicht erlaubt [Operation not permitted]
Do you now how to fix this ?
I am running a local pipeline on a Debian 8 Server and observe this issue with cromewell 21/24/25.
Thank you in advance!