Our staff will be observing the holiday and will be unavailable from 22nd to 25th November. This will cause a delay in reaching out to you and answering your questions immediately. Rest assured we will get back to it on Monday November 26th. We are grateful for your support and patience.
Have a great holiday everyone!!!
How does scatter-gather in WDL handle memory limits
Specifically in a LSF usage scenario. Say I have 10 samples that I pipe into GATK via WDL's scatter gather pipeline, and resource limit so that 10 samples cannot be run at the same time. Would WDL try to force the 10 jobs through and therefore gets killed by the job scheduler, or does it run a subset and keep within the memory limit?