This section of the forum is now closed; we are working on a new support model for WDL that we will share here shortly. For Cromwell-specific issues, see the Cromwell docs and post questions on Github.
Input folders for WDL
Hi @KateN @Geraldine_VdAuwera
So I'm trying to use WDL to write a pipeline that runs STAR, and in particular, one of those steps involves creating an index for STAR. (Note: I know STAR is not a Broad product and this question is not about its specifics). STAR creates about 15 files for its indices, and this is a real pain to drag around into the header of every file that uses them downstream. What would be super ideal is if I could output these all into a FOLDER and then have that folder be an output that I can in turn put into other functions. Is that possible?