Update: July 26, 2019
This section of the forum is now closed; we are working on a new support model for WDL that we will share here shortly. For Cromwell-specific issues, see the Cromwell docs and post questions on Github.

Cromwell option use_relative_output_paths not working as expected

mducarmducar Dana-FarberMember


I'm running Cromwell v42 on the Google cloud as a server and submitting jobs using curl. I'm passing in a JSON file for the workflowOptions, but it isn't behaving as described at:

I tried running the same workflow locally, and it behaved as expected. Is the use_relative_output_paths not supported when running on Google cloud? If so, that doesn't seem to be mentioned anywhere I could find in the documentation.


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