This section of the forum is now closed; we are working on a new support model for WDL that we will share here shortly. For Cromwell-specific issues, see the Cromwell docs and post questions on Github.
Starting to see some weird errors in PAPI
I have hundreds of jobs dying with:
"Task gnarlyPipeline.HardFilterAndMakeSitesOnlyVcf:44:1 failed. The job was stopped before the command finished. PAPI error code 3. Invalid value for field 'global': 'global'. Unknown global."
I'll note that this has affected ~10% of my running jobs, but the other 90% (within the scatter) all finished fine.