Make a list file (outputs.list) from the output of previous task.
I wrote a WDL script which generates multiple g.vcf files from my different samples (inspired by your WDL scripts) using HaplotypeCallerERC. I need to make the output of my previous task to be into one file (outputs.list) to pass it as an argument in the next tool which will be CombineGVCFs. IS that possible? And what is your suggestion for that please?
Thanks in advance