Update: July 26, 2019
This section of the forum is now closed; we are working on a new support model for WDL that we will share here shortly. For Cromwell-specific issues, see the Cromwell docs and post questions on Github.

How to access/download workflows reference files

Hi there,

This question is related to how to access the workflows reference files (from Google Storage?) not because there's an issue but because I don't understand how to do it.

I was trying to run "gatk3-4-rnaseq-germline-snps-indels" gatk workflow locally, but can't find a way to access/download the files mentioned in the JSON file starting with the following path:


Could you tell me the steps to follow to access this folder and download its content?

I also tried looking for the same content in GATK's ftp bundle, but it's not there.

Thank you very much in advance.


Best Answer


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