Attention: Want an end-to-end pipelining solution for GATK Best Practices?


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Cromwell + WDL

Cromwell workflow management system and Workflow Description Language support forum. For more information about WDL, see the WDL User Guide section. For more information about Cromwell, see the Cromwell Docs section. Cromwell also supports CWL; for CWL documentation and support, see https://www.commonwl.org/user_guide.

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