kribio

Hi, I try to download Illumina bait and target intervals from my workspace in Firecloud/TerraBio (see below the path) gs://gptag/somatic/aux/common_sites/whole_exome_illumina_coding_v1.Homo_sapiens_assembly19.baits.interval_list gs://gptag/somatic/aux/common_sites/whole_exome_illumina_coding_v1_plus_10bp_padding_minus_mito.Homo_sapiens_assembly19.targets.interval_list to estimate read coverage with Picard tools and I cannot. Any advise? Thank you

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  • Hi,

    I try to download Illumina bait and target intervals from my workspace in Firecloud/TerraBio (see below the path)

    gs://gptag/somatic/aux/common_sites/whole_exome_illumina_coding_v1.Homo_sapiens_assembly19.baits.interval_list

    gs://gptag/somatic/aux/common_sites/whole_exome_illumina_coding_v1_plus_10bp_padding_minus_mito.Homo_sapiens_assembly19.targets.interval_list

    to estimate read coverage with Picard tools and I cannot. Any advise?
    Thank you

    February 27
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    February 27