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(Quote) OK got it, thanks very much!
(Quote) My question is that how many rounds of non-recalibrated-Variant-calling and recalibrated-variant-calling should be done in order to get trustworthy results? what the 'trustworthy results' means? when i run some round of BQSR and get a lot of…
(Quote) i have follow your advise on knownsites.but some questions confued me. After rounds of non-recalibrated-Variant-calling and what BQSR result is right? Can i use the result to run VqSR as resourses ? -taylor