prichmond

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prichmond
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University of British Columbia
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  • Additionally, if I'm processing my whole pipeline using the SGE scheduler, then do I just put the call to the scala script within my job script that I submit to the cluster? I'm a bit confused as to how I'm supposed to use Queue within the larger f…
  • So when you say a job environment name, how would I include that into the scala script? Just as another argument? This is the script: package org.broadinstitute.gatk.queue.qscripts import org.broadinstitute.gatk.queue.QSettings import org.broadi…