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Hi Sheila, Thank you for the elaborate answer! In fact, I'm using UnifiedGenotyper for variant detection and I understand that by comparing variants I am close enough to comparing reads, however, if I understood correctly variant calling requires …
Hi Geraldine, I would like to get variants unique to a data set as well, but i was wondering if i could compare against reads rather than other variants ... is there an alternative that applies to my problem?? Thanks!