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Thanks, @bhanuGandham for your reply. Sorry, I'm new in this forum and I didn't know the best place to post a question. I'm using Gatk 4.0 and I really need to include non variants sites in my dataset. In the past, I used version 3.7, which allow …
Hi, I'm wondering if in this time, the option "Include non variant sites" in the output vcf of GenotypeGVCFs is already available? If not, someone could me give a tip how I can do that using another way?