Heads up:
We’re moving the GATK website, docs and forum to a new platform. Read the full story and breakdown of key changes on this blog.

Lien

About

Username
Lien
Location
Leuven
Joined
Visits
45
Last Active
Roles
Member
Points
7
Badges
2
Location
Leuven

Comments

  • One example that was found when the analysis was run per chromosome: * chr 20:58903718. 1730 reads of which 10 reads contain the alternative allele (6 on + strand, 4 on - strand). A few examples that were found when the analysis was run on all chr…
  • Dear Geraldine, I have a question regarding this parallelizing. I ran MuTect2 (GATK version3.6) on the entire BAM-file (from a capture experiment). For the -L argument, I entered the captured region plus 100 bases on each side. For your informatio…