Geraldine_VdAuwera

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Geraldine_VdAuwera
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Cambridge, MA
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  • Thanks for sticking with us for 6 years.
    July 20
  • Woody_Sinbad

    Hi,Geraldine:

    I try to run GATK4 Somatic CNV call wdl pipeline ,which published on github, but is the latest wdl file for somatic CNV test work ? I try to run it with my own interval but it seems I should use same interval file for tumor and normal but in the wdl ,it would use **PreprocessInterval **to preprocess the interval file for tumor ,what I can do to elude this problem ?

    is there any requirement on self-made interval file ?

    Thx a lot

    July 13
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    You received 5 Up Votes. We like that.
    May 30