Geraldine_VdAuwera

Folks, I'm sorry but I can't respond to questions on this page. Please post your questions in the public forum.

About

Username
Geraldine_VdAuwera
Location
Cambridge, MA
Joined
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Member, Administrator, Broadie
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Activity

  • bioinfolearner

    Hi,Dear Geraldine:
    I am right now struggling with a problem to solve strand bias in my project, so to filter false positive sites caused by strand bias, how should I use parameters --strand_artifact_lod and --strand_artifact_power_threshold, what are the recommended values? should I use them all in a project? If I want to make sure there are at least 2 reads which support variation in the direction compared with other DV reads in the other direction, I will be very appreciated if you could give me some suggestions.

    December 7
  • Vsarangi

    Hi Geraldine,
    I am trying to recreate some result using Mutsig 2.0, however i see from the posts that the link is no longer externally available. Will it be possible to get it any other way? Is there someone i can email, who can send me the link?
    Thank you,
    Vivek

    November 13