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scatter

Using IntervalListTools to create scatter intervals for HaplotypeCaller

Accepted Answer 54 views 6 comments 1 point Most recent by BTH May 6Ask the GATK team
Problem with scatter Array[File] for intervals' bed file

Accepted Answer 53 views 1 comment 0 points Most recent by Ruchi September 2018Ask the Cromwell + WDL Team
scatter-gather multiple paired-end alignment (bwa)

Answered 293 views 3 comments 0 points Most recent by ChrisL May 2018Ask the Cromwell + WDL Team
Split and collect files?

Accepted Answer 65 views 2 comments 0 points Most recent by edavis November 2017Ask the Cromwell + WDL Team
Picard MergeVcfs vs GATK CatVariants

Accepted Answer 1.2K views 2 comments 0 points Most recent by shawarden September 2016Ask the GATK team