Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
how to build gatk?
I'm trying to build gatk from the source but I can't find any guides on this.
I tried cloning the git:
git clone git://github.com/broadgsa/gatk-protected.git
then running "ant" from that directory. What am I missing?
I get a bunch of "illegal start of type" errors and then this:
/home/paultanger/gatk-protected/build.xml:453: Compile failed; see the compiler error output for details.