The Frontline Support team will be offline February 18 for President's Day but will be back February 19th. Thank you for your patience as we get to all of your questions!
I run into the errors below, when I try to run the StructuralVariationDiscoveryPipelineSpark to discover structural variants in a given sample:
ERROR Executor: Exception in task 0.0 in stage 5.0 (TID 50)
java.lang.IllegalArgumentException: provided start is negative: -36
I am not sure why the tool has to throw up these errors when every other thing seems fine. I wiil appreciate if you could shed some light on this.