The frontline support team will be unavailable to answer questions until May27th 2019. We will be back soon after. Thank you for your patience and we apologize for any inconvenience!
UmiAwareMarkDuplicatesWithMateCigar between Picard 2.9.0 and 2.18.9
My institution is moving the HPC servers, and as a side effect causes a small downgrade of Picard, from 2.18.9 to 2.9.0. I have followed the release notes and there seems to have no algorithm changes between these two versions aside from the metrics output. Can the GATK team please confirm that's the case? Thanks!