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Test-drive the GATK tools and Best Practices pipelines on Terra
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Mutect 2 B38 germline resource
Congratulations on GATK 4.0!
I'm looking at the instructions for Mutect2 where it suggests using a germline resource "--germline-resource af-only-gnomad.vcf.gz".
Do you have a version of this for b38 coming? Or know where I could obtain one?