Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Identify family relationships
I've received a set of g.VCF files belonging to individuals of several different families and I've been asked to identify which samples belong together (same family) and what is the relationship among them (father, mother, sons, etc.). Is this something I could figure out using GATK?
Any help on this would be really appreciated.
Thanks in advanced.