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Files needed for variant recalibration for Arabidopsis thaliana
I am analyzing different Arabidopsis thaliana ecotypes for the first time using GATK. I am following the best practices guidelines without any problem but when I reached the step for variant recalibration
I cannot find the files necessary for the argument --resource ( I only found these files for human but not for Arabidopsis ). I am stuck at this point any help would be much appreciated.
Thank you very much,