The frontline support team will be slow on the forum because we are occupied with a GATK Workshop on March 26th and 27th 2019. We will be back and available to answer questions on the forum on March 28th 2019.
ReadBackedPhasing Read Depths
Is it intended that ReadBackedPhasing does not propagate the read depths of merged SNVs (and if so, why not)? My lab is considering going back to the original and getting the minimum read depth and allele depths so as to have this information for such variants.