Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
I would like to use the ContEst and I was wondering from where I can derive the populationSites.interval_list
I have the intervalListFromRTC.intervals for the samples from RealignerTargetCreator but these are not the populationSites interval. Right?