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HaplotypeCaller/ Variantannotator no allele balance tag for all SNPs
Version 3.1.1. Human normal samples.
I couldnt find AlleleBalance and AlleleBalanceBySample tags in my vcf outputs. Tags are not found even for single variant
I tried HaplotypeCaller with -all or directly with -A AlleleBalance or -A AlleleBalanceBySample.
Also I tried Variantannotator with -all or -A AlleleBalance or -A AlleleBalanceBySample.
Any help will be apreciated