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Is it possible to improve compile time of GATK/Queue
I was wondering if it's possible to improve the compile time of GATK. I'm aware of
mvn verify -P\!queue
to avoid building Queue when compiling gatk-public. However, when developing Queue, the compile time for gatk-protected is huge, slowing down the development. Especially, the step
[INFO] Minimizing jar org.broadinstitute.gatk:gatk-queue-package-distribution:jar:3.3
takes a long time. Do you have any tricks up your sleeve to improve this during development? (I'm working on a custom JobRunner)