Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
SNP in promoter region
Hai, I have Exome-seq and RNA-seq data and I try to find SNP in those sample. I know that the SNP is not in the gene itself but in the promoter region. From what I know, Exome-seq and RNA-seq do not cover promoter region. What is your suggestion about this? Probably you can share some expreience how to find SNP in promoter regiuon with RNA-seq and Exome-seq. data Thank you.