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SNP in promoter region
Hai, I have Exome-seq and RNA-seq data and I try to find SNP in those sample. I know that the SNP is not in the gene itself but in the promoter region. From what I know, Exome-seq and RNA-seq do not cover promoter region. What is your suggestion about this? Probably you can share some expreience how to find SNP in promoter regiuon with RNA-seq and Exome-seq. data Thank you.