Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Inbreeding coefficient calculation documentation available?
Is there a description available for the inbreeding coefficient calculation used for variant recalibration?
and that page points to here for the details for the method:
document on statistical tests
but there is no description of the inbreeding coefficient (just the rank sum test).