Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Filtering on allele balance by sample using jexl
I would like to filter my variants using the SelectVariants walker but it throws an error when I try to filter on allele balance by sample. The jexl expression I use is:
unknown, ambiguous or inaccessible method getAB
Is there any way of filtering on this parameter?