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Trimming of Adaptor sequence?

snijeshsnijesh hosurMember

I have heard we can import raw data into GATK pipeline without trimming the adaptors. Is it not necessary to remove adaptors from the sequence?
Also, I have asked the same questions in different blog. Please give me a convincing answer
https://www.researchgate.net/post/what_is_the_chance_of_adaptor_sequence_getting_mapped_to_the_reference_genome?595e1369615e27427670472b#595f39184048547e155d9a23
https://www.researchgate.net/post/Is_it_necessary_to_remove_over_represented_sequences_in_the_NGS_data
Thank You

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