If you happen to see a question you know the answer to, please do chime in and help your fellow community members. We encourage our fourm members to be more involved, jump in and help out your fellow researchers with their questions. GATK forum is a community forum and helping each other with using GATK tools and research is the cornerstone of our success as a genomics research community.We appreciate your help!
Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Obtaining the data used in automated tests in a more automated manner
GATK has integration tests that depend on data, I presume all part of the GATK bundle. Is there anything in the build that downloads the expected data in a more automated manner than me manually downloading these to my computer? I assume something exists because you have automated testing, but I'm not seeing it. Thanks for any help.