To celebrate the release of GATK 4.0, we are giving away free credits for running the GATK4 Best Practices pipelines in FireCloud, our secure online analysis portal. It’s first come first serve, so sign up now to claim your free credits worth $250. Sponsored by Google Cloud. Learn more at

Indel Realigner - no Knowns

WestcottWestcott BerkeleyMember

Hi all,
I'm working through the best practices and am a bit of a novice.
I'm working on a non-model organism with no known indel list. Is it still useful to use the Indel realigner?

Best Answer


Sign In or Register to comment.