Attention:
The frontline support team will be unavailable to answer questions on April 15th and 17th 2019. We will be back soon after. Thank you for your patience and we apologize for any inconvenience!

REGARDING COMBINING VARIANTS IN CLOUDMAP IN GALAXY

SUPISUPI USAMember

Hi
I am new to sequencing and i tried with galaxy i am done with vcf files of all mutants and now i have to combine variants but its showing error the tool is as follows
https://usegalaxy.org/root?tool_id=toolshed.g2.bx.psu.edu/repos/devteam/variant_combine/gatk_variant_combine/0.0.4
Please help what is wrong and how i can correct that

Comments

  • SheilaSheila Broad InstituteMember, Broadie, Moderator admin

    @SUPI
    Hi,

    I am not quite sure what you are asking? We cannot help with Galaxy issues. You will have to ask them for help. However, if you are running a GATK tool and get some error message not related to Galaxy, please post the full error message and log output from the run here and we can try to help.

    -Sheila

Sign In or Register to comment.