Our staff will be observing the holiday and will be unavailable from 22nd to 25th November. This will cause a delay in reaching out to you and answering your questions immediately. Rest assured we will get back to it on Monday November 26th. We are grateful for your support and patience.
Have a great holiday everyone!!!
In the picard CrosscheckReadGroupFingerprints command, it asks for a Haplotype_map file. What format does Haplotype_map file need to be in? If you have multiple BAM files with the same RG tag, would this command work? If not, what is the best way to edit 6000+ BAM files to have unique RG tag names?