Test-drive the GATK tools and Best Practices pipelines on Terra


Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

Any plan for MuTect2 to support calling more than a single tumor-normal pair at a time?

I would like to be able to compare many samples to each other at a time to find the frequency of somatic SNP appearance across multiple samples. Are there any plans to allow for MuTect2 to make multiple comparisons at a time?

Tagged:

Best Answer

Answers

  • somvarsomvar Member

    I am not using it for tumor/cancer analysis, but rather to pick up all of the variants between different samples taken from a single individual. But good to know, thanks for the reply!

Sign In or Register to comment.