haplotypecaller new version strand bias

2nelly2nelly SwitzerlandMember
edited January 2017 in Ask the GATK team

Hi all,
I am wondering how can we use the Strand bias annotation in new version? The argument -A StrandBiasSample is not available any more

Please see the error message below.

ERROR MESSAGE: Invalid command line: Argument annotation has a bad value: Annotation StrandBiasSample was not found; please check that you have specified the annotation name correctly

Thank you for your answers in advance.

Answers

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