Test-drive the GATK tools and Best Practices pipelines on Terra
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DP field Mutect2
I have used Mutect2 in order to do variant calling. I have obtained my vcf file but I don't have DP field in records section of the file, it is reported only in the header section. I can see the AD field, but I would like to know how many read I have after filtering.
Thank you in advance!