Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

local realignment of tumor and normal pair samples

In the realignment step using RealignerTargetCreator and IndelRealigner, for tumor and normal pair, should they run this step separately or together using, e.g. -I tumor.bam -I normal.bam?


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