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reference sites FORMAT output
Is it possible to report GT:AD:DP:GQ:PL for sites with reference calls just like the sites with snp/indel calls? In the example below, I have a position with reference call and a position wiht indel.
chr1 11863158 . T . . . DP=1994;MQ=48.86;MQ0=90 GT ./.
chr1 16055173 . AGA A 0 LowQual AC=0;AF=0.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=0;MLEAF=0.00;MQ=49.45;MQ0=0;SOR=0.011 GT:AD:DP:GQ:PL 0/0:50,0:90:99:0,150,2034