Hi GATK Users,

Happy Thanksgiving!
Our staff will be observing the holiday and will be unavailable from 22nd to 25th November. This will cause a delay in reaching out to you and answering your questions immediately. Rest assured we will get back to it on Monday November 26th. We are grateful for your support and patience.
Have a great holiday everyone!!!

GATK Staff

Thresholds for variants filtering

Hi all,
I would like to ask about thresholds used to filter out variants. What thresholds should I use and why ?

I appreciate any help,
Thank you.


Best Answer


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