Convert Mutect1 output to VCF
Hi Geraldine & Sheila,
I have run Mutect1 (1.1.7) on whole genome sequences and got the output as a text file. Is there a way to convert this to VCF?
I found out now that one can specify --vcf argument while running Mutect. But is there a way to convert after the run. I don;t want to repeat the analysis.