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GenotypeGVCFs: stand_emit_conf not defined

Hi, I got an error from GenotypeGVCF that says the argument stand_emit_conf is not defined, while the documentation of GenotypeGVCF has that option.


Here is the command line I used. I am using GATK 3.6, I tried the 9/7, 9/26, 9/27 nightly builds and they gave me the same error.

$ ~/bin/java-1.8.0/bin/java -Xmx2g -jar ~/bin/GenomeAnalysisTK.jar -T GenotypeGVCFs -R ~/ref/hs37d5.fa -V samples135.20.g.vcf -o samples135.20.vcf -stand_call_conf 5.0 -stand_emit_conf 5.0 -inputPrior 0.0010 -inputPrior 0.4995 -A GCContent -A BaseCounts

ERROR ------------------------------------------------------------------------------------------
ERROR A USER ERROR has occurred (version nightly-2016-09-07-gb85fea3):
ERROR This means that one or more arguments or inputs in your command are incorrect.
ERROR The error message below tells you what is the problem.
ERROR If the problem is an invalid argument, please check the online documentation guide
ERROR (or rerun your command with --help) to view allowable command-line arguments for this tool.
ERROR Visit our website and forum for extensive documentation and answers to
ERROR commonly asked questions https://www.broadinstitute.org/gatk
ERROR Please do NOT post this error to the GATK forum unless you have really tried to fix it yourself.
ERROR MESSAGE: Argument with name 'stand_emit_conf' isn't defined.
ERROR ------------------------------------------------------------------------------------------


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