If you happen to see a question you know the answer to, please do chime in and help your fellow community members. We appreciate your help!

Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

str_contraction filter

We have an expected mutation filtered out due to "str_contraction" in mutect2. Are there any options to fine-tune this filter? If yes, what can be changed? thanks.


Best Answer


Sign In or Register to comment.