Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
DepthOfCoverage Genelist Error
I am trying to use DepthofCoverage to find coverage of genes on my samples. My genome is Oryza sativa japonica Nipponbare (MSU Rice Genome Release 7). I am however running it without any gene input, as I am unable to find the gene list for my genome. Can you help me retrieve the genelist on RefSeq format for my genome.