Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Command Line vs Graphical User Interface
Instead of using the command line, is it possible to develop a graphical user interface for more efficient use of the tools?
I know there are certain tasks that would perform better using command lines and this is a scientific software but writing commands is a bit troublesome, especially when it is mostly repetitive with only a few tweaks to run similar problems, and I was wondering if there are any better alternatives.
Looking forward to hearing from you.