For some reason I'm having trouble viewing certain parts of the GATK website, namely just about any of the walker pages. They are showing up as just blank on every machine in my lab.
Actually this is an old link /broken redirect problem. You should be getting to https://www.broadinstitute.org/gatk/guide/tooldocs/org_broadinstitute_gatk_tools_walkers_variantutils_CombineVariants.php
Will check/fix the redirects. In the meantime, you'll need to update your bookmarks from the tooldocs page here: https://www.broadinstitute.org/gatk/guide/tooldocs/
Hmm, they're working for me. When you say just about, do you mean most or all?
Oh boy, maybe this is something on our end!
I see that https://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_gatk_tools_walkers_variantutils_CombineVariants.php is showing up blank, when I view source, all I see is:
~ Copyright (c) 2012, The Broad Institute
~ Permission is hereby granted, free of charge, to any person
~ obtaining a copy of this software and associated documentation
~ files (the "Software"), to deal in the Software without
~ restriction, including without limitation the rights to use,
~ copy, modify, merge, publish, distribute, sublicense, and/or sell
~ copies of the Software, and to permit persons to whom the
~ Software is furnished to do so, subject to the following
~ The above copyright notice and this permission notice shall be
~ included in all copies or substantial portions of the Software.
~ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
~ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
~ OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
~ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
~ HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
~ WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
~ FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
~ OTHER DEALINGS IN THE SOFTWARE.
Ah, that one's bugging for me too. I think I know what's up -- will fix asap.
Thanks Geraldine! You are the best!