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snpEff and variantAnnotator


I would like to use snpEFF with variantAnnotator. I read here http://gatkforums.broadinstitute.org/discussion/50/adding-genomic-annotations-using-snpeff-and-variantannotator that it is better to use the GRCh37.64 database with SnpEff 2.0.5. Would I have wrong results if I use the GRCh38? I made all my previous analysis, alignment etc based on the GRCh38 reference human genome, so I suppose it would be wrong to use the GRCh37 to annotate. Am I right?

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